Full genome characterization of two novel Alpha-coronavirus species from Italian bats
Identifieur interne : 000C79 ( Main/Exploration ); précédent : 000C78; suivant : 000C80Full genome characterization of two novel Alpha-coronavirus species from Italian bats
Auteurs : Luca De Sabato [Italie] ; Davide Lelli [Italie] ; Francesca Faccin [Italie] ; Sabrina Canziani [Italie] ; Ilaria Di Bartolo [Italie] ; Gabriele Vaccari [Italie] ; Ana Moreno [Italie]Source :
- Virus Research [ 0168-1702 ] ; 2018.
Descripteurs français
- KwdFr :
- Animaux, Biologie informatique, Chiroptera (virologie), Coronavirus (), Coronavirus (génétique), Coronavirus (isolement et purification), Génome viral, Infections à coronavirus (médecine vétérinaire), Infections à coronavirus (virologie), Italie, Phylogénie, Similitude de séquences, Séquençage nucléotidique à haut débit.
- MESH :
- génétique : Coronavirus.
- isolement et purification : Coronavirus.
- médecine vétérinaire : Infections à coronavirus.
- virologie : Chiroptera, Infections à coronavirus.
- Animaux, Biologie informatique, Coronavirus, Génome viral, Italie, Phylogénie, Similitude de séquences, Séquençage nucléotidique à haut débit.
- Wicri :
- geographic : Italie.
English descriptors
- KwdEn :
- Animals, Chiroptera (virology), Computational Biology, Coronavirus (classification), Coronavirus (genetics), Coronavirus (isolation & purification), Coronavirus Infections (veterinary), Coronavirus Infections (virology), Genome, Viral, High-Throughput Nucleotide Sequencing, Italy, Phylogeny, Sequence Homology.
- MESH :
- geographic : Italy.
- classification : Coronavirus.
- genetics : Coronavirus.
- isolation & purification : Coronavirus.
- veterinary : Coronavirus Infections.
- virology : Chiroptera, Coronavirus Infections.
- Animals, Computational Biology, Genome, Viral, High-Throughput Nucleotide Sequencing, Phylogeny, Sequence Homology.
Abstract
Three Alpha-CoV strains were fully sequenced by NGS method. The Italian strains were classified into two novel Alpha-CoV species. The phylogenetic analysis on RdRp fragment sequences showed correlation to European strains.
Url:
DOI: 10.1016/j.virusres.2018.11.007
PubMed: 30447246
PubMed Central: 7114869
Affiliations:
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Le document en format XML
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Bartolo</name><affiliation wicri:level="3"><nlm:aff id="aff0010">Department of Food Safety, Nutrition and Veterinary Public Health, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Food Safety, Nutrition and Veterinary Public Health, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161, Rome</wicri:regionArea><placeName><settlement type="city">Rome</settlement><region nuts="2">Latium</region></placeName></affiliation></author><author><name sortKey="Vaccari, Gabriele" sort="Vaccari, Gabriele" uniqKey="Vaccari G" first="Gabriele" last="Vaccari">Gabriele Vaccari</name><affiliation wicri:level="3"><nlm:aff id="aff0010">Department of Food Safety, Nutrition and Veterinary Public Health, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161, Rome, Italy</nlm:aff><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Food Safety, Nutrition and Veterinary Public 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(virologie)</term><term>Italie</term><term>Phylogénie</term><term>Similitude de séquences</term><term>Séquençage nucléotidique à haut débit</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Italy</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Coronavirus</term></keywords><keywords scheme="MESH" qualifier="médecine vétérinaire" xml:lang="fr"><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="veterinary" xml:lang="en"><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Chiroptera</term><term>Infections à coronavirus</term></keywords><keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Chiroptera</term><term>Coronavirus Infections</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>Computational Biology</term><term>Genome, Viral</term><term>High-Throughput Nucleotide Sequencing</term><term>Phylogeny</term><term>Sequence Homology</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Biologie informatique</term><term>Coronavirus</term><term>Génome viral</term><term>Italie</term><term>Phylogénie</term><term>Similitude de séquences</term><term>Séquençage nucléotidique à haut débit</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Italie</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><title>Highlights</title><p><list list-type="simple" id="lis0005"><list-item id="lsti0005"><label>•</label><p id="par0005">Three Alpha-CoV strains were fully sequenced by NGS method.</p></list-item><list-item id="lsti0010"><label>•</label><p id="par0010">The Italian strains were classified into two novel Alpha-CoV species.</p></list-item><list-item id="lsti0015"><label>•</label><p id="par0015">The phylogenetic analysis on RdRp fragment sequences showed correlation to European strains.</p></list-item></list></p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Ancillotto, L" uniqKey="Ancillotto L">L. Ancillotto</name></author><author><name sortKey="Santini, L" uniqKey="Santini L">L. Santini</name></author><author><name sortKey="Ranc, N" uniqKey="Ranc N">N. Ranc</name></author><author><name sortKey="Maiorano, L" uniqKey="Maiorano L">L. Maiorano</name></author><author><name sortKey="Russo, D" uniqKey="Russo D">D. Russo</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Annan, A" uniqKey="Annan A">A. Annan</name></author><author><name sortKey="Baldwin, H J" uniqKey="Baldwin H">H.J. Baldwin</name></author><author><name sortKey="Corman, V M" uniqKey="Corman V">V.M. Corman</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Apweiler, R" uniqKey="Apweiler R">R. Apweiler</name></author><author><name sortKey="Attwood, T K" uniqKey="Attwood T">T.K. Attwood</name></author><author><name sortKey="Bairoch, A" uniqKey="Bairoch A">A. 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Yuen</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Italie</li></country><region><li>Latium</li></region><settlement><li>Rome</li></settlement></list><tree><country name="Italie"><region name="Latium"><name sortKey="De Sabato, Luca" sort="De Sabato, Luca" uniqKey="De Sabato L" first="Luca" last="De Sabato">Luca De Sabato</name></region><name sortKey="Canziani, Sabrina" sort="Canziani, Sabrina" uniqKey="Canziani S" first="Sabrina" last="Canziani">Sabrina Canziani</name><name sortKey="De Sabato, Luca" sort="De Sabato, Luca" uniqKey="De Sabato L" first="Luca" last="De Sabato">Luca De Sabato</name><name sortKey="Di Bartolo, Ilaria" sort="Di Bartolo, Ilaria" uniqKey="Di Bartolo I" first="Ilaria" last="Di Bartolo">Ilaria Di Bartolo</name><name sortKey="Faccin, Francesca" sort="Faccin, Francesca" uniqKey="Faccin F" first="Francesca" last="Faccin">Francesca Faccin</name><name sortKey="Lelli, Davide" sort="Lelli, Davide" uniqKey="Lelli D" first="Davide" last="Lelli">Davide Lelli</name><name sortKey="Moreno, Ana" sort="Moreno, Ana" uniqKey="Moreno A" first="Ana" last="Moreno">Ana Moreno</name><name sortKey="Vaccari, Gabriele" sort="Vaccari, Gabriele" uniqKey="Vaccari G" first="Gabriele" last="Vaccari">Gabriele Vaccari</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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